Supporting Dataset for "Directed Mammalian Gene Regulatory Networks
Using Expression and Comparative Genomic Hybridization Microarray Data
from Radiation Hybrids"
by S Ahn, RT Wang, CC Park, A Lin, RM Leahy, K Lange and DJ Smith
RH network dataset (CorrCoef.txt.gz)
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Please be patient. The file size is large (>1.5GB).
We may send you the dataset on DVD upon request.
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The file contains an adjacency matrix (20,145 by 20,145) for the weighted and directed RH network.
The first column and the first row include gene names.
The number in row i and column j represents the correlation coefficient
between aCGH data for gene i and expression data for gene j,
that is, a test statistic assessing whether gene i regulates gene j.
The dataset only includes trans pairs.
(See the paper for details.)
If you have any problem,
please contact Desmond Smith (DSmith[at]mednet[dot]ucla[dot]edu).