Supporting Dataset for "Directed Mammalian Gene Regulatory Networks
Using Expression and Comparative Genomic Hybridization Microarray Data
from Radiation Hybrids"
by S Ahn, RT Wang, CC Park, A Lin, RM Leahy, K Lange and DJ Smith
RH network dataset (CorrCoef.txt.gz)
Please be patient. The file size is large (>1.5GB).
We may send you the dataset on DVD upon request.
The file contains an adjacency matrix (20,145 by 20,145) for the weighted and directed RH network.
The first column and the first row include gene names.
The number in row i and column j represents the correlation coefficient
between aCGH data for gene i and expression data for gene j,
that is, a test statistic assessing whether gene i regulates gene j.
The dataset only includes trans pairs.
(See the paper for details.)
If you have any problem,
please contact Desmond Smith (DSmith[at]mednet[dot]ucla[dot]edu).